Biotechnology Terms Starting With B

B

Biotechnology Glossary: B

Biomass EnergyComputational BiologyPlant TransformationPharmaceutical BiotechnologyIndustrial Biotechnology

Biofuel

/ BY-oh-fyoo-ul /  ·  Greek bios, life; Old French fueille

Biomass EnergyIntro

Biofuel biofuel is a fuel derived from biological materials, primarily plant biomass, algae, or microbial fermentation products, as a renewable alternative to fossil fuels.

First-generation biofuels such as ethanol from corn or sugarcane and biodiesel from vegetable oils are commercially established but compete with food production for arable land and water. Second-generation biofuels use lignocellulosic biomass such as agricultural residues and dedicated energy grasses, avoiding direct food competition. Third-generation biofuels from algae offer yields per acre that can exceed those of terrestrial crops by tenfold or more, and algae can be cultivated on non-arable land using brackish or wastewater, though commercial-scale production remains economically challenging.

Did you know?

Certain strains of the green alga Botryococcus braunii can accumulate hydrocarbons at up to 75% of their dry cell weight, a higher energy density than most plant-based feedstocks. Unlike ethanol, these hydrocarbons are chemically similar to petroleum and could be refined using existing fuel infrastructure without engine modification.

Biomass Energy Pros and Cons →
Common misconception

All biofuels are automatically carbon neutral. Growing, harvesting, processing, and transporting biofuel feedstocks all consume energy, and land-use changes such as clearing forests for energy crops can release more carbon dioxide than the fuel saves over decades.

Example in nature

Saccharomyces cerevisiae (baker's yeast) ferments sugars extracted from sugarcane into ethanol at industrial scale in Brazil, where the process yields roughly 7,000 liters of ethanol per hectare of cane per year. That ethanol is blended with gasoline at concentrations up to 27% for use in standard vehicle engines across the country.

Yeast →

Bioinformatics

/ by-oh-in-for-MAT-iks /  ·  Greek bios, life; Latin informare, to instruct

Computational BiologyIntermediate
Also known as:computational biology (related)

Bioinformatics is the application of computational tools and statistical methods to collect, store, analyze, and interpret large-scale biological data, particularly genomic and proteomic datasets.

The field emerged from the need to manage and analyze the massive data outputs of DNA sequencing, protein structure determination, and high-throughput experiments. Core tasks include sequence alignment, genome assembly, gene prediction, phylogenetic analysis, and protein structure prediction. Modern bioinformatics increasingly incorporates machine learning, exemplified by DeepMind’s AlphaFold2 program, which in 2021 predicted the three-dimensional structures of more than 200 million proteins with accuracy rivaling experimental methods.

Those predictions are freely available in the AlphaFold Protein Structure Database and have accelerated drug discovery research worldwide.

Did you know?

The BLAST sequence alignment tool, released by the National Center for Biotechnology Information in 1990, can compare a query DNA or protein sequence against databases containing billions of known sequences in seconds. Before BLAST, performing equivalent comparisons manually would have taken months of computation on the hardware available at the time.

Common misconception

Bioinformatics is only computer programming. The field also requires deep knowledge of molecular biology, statistics, experimental design, and data quality assessment, because errors in biological interpretation cannot be caught by code alone.

Example in nature

Researchers used bioinformatics tools to compare thousands of SARS-CoV-2 genome sequences collected from patients across six continents during 2020. Phylogenetic analysis of those sequences revealed distinct transmission lineages and helped public health agencies trace how specific variants spread between countries within days of their emergence.

Biolistics

/ by-oh-LIS-tiks /  ·  Greek bios, life; ballistics

Plant TransformationAdvanced
Also known as:gene gunmicroprojectile bombardment

Biolistics is a physical method of introducing DNA into cells by coating tungsten or gold microparticles with nucleic acid and firing them into tissue at high velocity using a gene gun.

Developed by John Sanford and colleagues at Cornell University in the 1980s, biolistics bypasses the host-range limitations of biological transformation vectors and can deliver DNA into chloroplasts and mitochondria as well as nuclear genomes. The method is particularly important for transforming monocot crops such as maize and wheat that are recalcitrant to Agrobacterium-mediated transformation. Gold particles used in biolistics typically range from 0.6 to 1.6 micrometers in diameter, small enough to penetrate cell walls without causing lethal damage to most target cells.

Did you know?

Biolistics has been used to vaccinate fish against infectious diseases on aquaculture farms. Salmon fry can be immunized by immersing them in a bath while a gene gun fires DNA-coated gold particles through the skin, eliminating the need to inject each fish individually.

Common misconception

DNA always enters cells through viruses or bacteria in biotechnology. Biolistics is a purely physical delivery method that uses kinetic energy rather than any living vector, and it can transform species that no known biological vector can infect.

How Are Viruses Different From Bacteria? →
Example in nature

Researchers use a gene gun to deliver DNA-coated gold particles into maize (Zea mays) embryos, penetrating the tough cell walls that block Agrobacterium infection. Transformed embryos are then cultured on selective media, and those that stably incorporate the new gene can regenerate into fertile, genetically modified plants within eight to twelve weeks.

Biopharmaceutical

/ by-oh-far-mah-SYOO-tih-kul /  ·  Greek bios, life; Greek pharmakeia, drug making

Pharmaceutical BiotechnologyIntermediate
Also known as:biologics

Biopharmaceutical biopharmaceutical is a therapeutic product derived from biological sources, including recombinant proteins, monoclonal antibodies, vaccines, and cell therapies, as opposed to chemically synthesized small-molecule drugs.

Biopharmaceuticals are produced using living cells engineered to express a therapeutic protein, then purified through multiple chromatographic steps before formulation. They include recombinant insulin, erythropoietin, monoclonal antibodies, and blood clotting factors that have transformed the treatment of diabetes, anemia, cancer, and hemophilia. Because biopharmaceuticals are large molecules that digestive enzymes would degrade, most are administered by injection or infusion rather than taken orally.

The global biopharmaceutical market exceeded 400 billion dollars in annual sales by the early 2020s, reflecting how central these products have become to modern medicine.

Did you know?

Rituximab, approved in 1997, was among the first monoclonal antibody biopharmaceuticals approved for cancer treatment and targets the CD20 protein on B-cell lymphoma cells. Its approval opened a new category of cancer therapy and was followed by dozens of additional antibody drugs targeting different tumor antigens.

How To Become An Oncologist? →
Common misconception

All medicines are made by chemical synthesis in a flask. Recombinant insulin, monoclonal antibodies, and many vaccines are produced inside living cells, whose biological machinery assembles and folds these large molecules in ways that chemical synthesis cannot replicate.

Immune System Fun Facts →
Example in nature

Recombinant human erythropoietin is produced in Chinese hamster ovary (CHO) cells engineered to carry the human EPO gene. Patients with chronic kidney disease receive injections of this protein to stimulate red blood cell production, because their damaged kidneys can no longer produce sufficient erythropoietin on their own.

Recombinant Proteins →

Bioprocessing

/ BY-oh-PROSS-es-ing /  ·  Greek bios, life; Latin processus, advance

Industrial BiotechnologyIntermediate
Also known as:upstream and downstream processing

Bioprocessing is the set of procedures used to convert raw biological materials into valuable products, encompassing cell culture, fermentation, extraction, and purification steps.

Upstream bioprocessing involves growing cells or microorganisms in bioreactors under optimized conditions of temperature, pH, dissolved oxygen, and nutrient supply to maximize production of the desired biomolecule. Downstream bioprocessing includes cell harvesting, lysis where needed, centrifugation, chromatographic purification, and formulation to yield a pure, stable, and safe final product. For biopharmaceuticals, downstream processing can account for 50 to 80 percent of total manufacturing costs, driving substantial innovation in membrane filtration and continuous chromatography.

A single 20,000-liter bioreactor run producing a monoclonal antibody may require weeks of downstream processing before the product meets regulatory purity standards.

Did you know?

Continuous bioprocessing, in which cells are grown and product is harvested simultaneously without stopping the culture, can reduce the facility footprint needed to match the output of traditional batch manufacturing by more than 50 percent. Several biopharmaceutical manufacturers began transitioning to continuous processing in the 2010s to lower costs and improve product consistency.

Are Enzymes Proteins? →
Common misconception

Biotechnology ends when cells make the product. Downstream purification, viral inactivation, sterile filtration, and extensive quality testing are equally important stages of bioprocessing, and a failure at any of these steps can disqualify an entire production batch.

Example in nature

To manufacture a therapeutic monoclonal antibody, Chinese hamster ovary (CHO) cells are first grown in a stirred-tank bioreactor for ten to fourteen days, reaching densities of tens of millions of cells per milliliter. The culture fluid is then processed through a series of protein A affinity chromatography, ion exchange, and nanofiltration steps that together remove host cell proteins, DNA, and potential viral contaminants before the antibody is formulated for injection.

Bioreactor

/ BY-oh-ree-ak-ter /  ·  Greek bios, life; Latin re-, again; agere, to act

BioprocessingIntermediate
Also known as:fermentor (industrial context)

Bioreactor bioreactor is a vessel designed to maintain controlled biological and chemical conditions, including temperature, pH, oxygen, and nutrient supply, to support the growth of microorganisms or cells for industrial production.

Stirred-tank bioreactors are the most common design for microbial fermentation, while wave bioreactors and hollow-fiber systems are preferred for sensitive mammalian cell cultures that cannot tolerate the shear forces of mechanical stirring. Process parameters are monitored and controlled in real time using sensors and automated feedback loops to maximize yield and product quality. Industrial bioreactors span an enormous range of scales, from bench-top vessels holding a few hundred milliliters to production tanks exceeding 20,000 liters used to manufacture monoclonal antibodies.

At the largest scales, maintaining uniform oxygen distribution and temperature throughout the culture volume requires sophisticated impeller designs and sparging systems.

Did you know?

Single-use bioreactors made from pre-sterilized plastic bags have become standard in many biopharmaceutical facilities because they eliminate the cleaning validation steps required for stainless steel vessels, cutting the time needed to switch between products from weeks to days. Some single-use systems can accommodate culture volumes of up to 2,000 liters.

Common misconception

A bioreactor is just a large tank. It is a precisely monitored and controlled system in which sensors, pumps, and automated controllers continuously adjust conditions to keep living cultures productive and prevent contamination.

Example in nature

Industrial bioreactors grow Chinese hamster ovary (CHO) cells at densities exceeding 20 million cells per milliliter to produce monoclonal antibodies. Dissolved oxygen must be held within a narrow range, typically 30 to 50 percent of air saturation, because levels outside this window reduce cell viability and antibody quality within hours.

Biosensor

/ BY-oh-sen-ser /  ·  Greek bios, life; Latin sensus, feeling

Diagnostic BiotechnologyIntermediate

Biosensor biosensor is an analytical device that combines a biological recognition element, such as an enzyme, antibody, or nucleic acid, with a physicochemical transducer to detect and quantify a specific analyte.

The first biosensor, developed by Leland Clark in 1962, coupled the enzyme glucose oxidase to an electrochemical oxygen electrode to measure blood glucose concentration. Modern biosensors are used in clinical diagnostics, food safety testing, environmental monitoring, and point-of-care devices that return results in minutes without laboratory infrastructure. Emerging biosensors exploit aptamers, CRISPR-Cas proteins, and synthetic receptors to detect targets ranging from single viral particles to parts-per-trillion concentrations of environmental toxins.

The SHERLOCK platform, based on the CRISPR-Cas13 enzyme, can identify specific RNA sequences from pathogens such as Zika virus in a patient sample within an hour.

Did you know?

Continuous glucose monitors worn by people with diabetes use a biosensor filament inserted just under the skin to measure interstitial glucose every few minutes and transmit readings wirelessly to a smartphone. Some systems can automatically signal an insulin pump to adjust delivery, creating a closed-loop artificial pancreas without any manual blood draws.

Common misconception

Biosensors always detect living organisms. Many biosensors detect non-living analytes such as glucose molecules, heavy metal ions, hormone concentrations, or specific DNA sequences, and the biological recognition element is used for its binding specificity rather than its ability to sense life.

Endocrine System Fun Facts →
Example in nature

A handheld glucose meter uses glucose oxidase immobilized on a disposable test strip to catalyze the oxidation of glucose in a fingertip blood drop, generating a small electrical current proportional to glucose concentration. Most modern strips return a reading in five seconds or less from a sample volume of less than one microliter.

Are Enzymes Proteins? →