Top : Databases : RNA Databases
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5S ribosomal RNA Database
- The purpose of this database is to provide information on nucleotide sequences of 5S rRNAs and their genes. The sequences for particular organisms can be retrieved as single files using a taxonomic browser or in multiple sequence structural alignments.
http://www.man.poznan.pl/5SData/
Added: 18-Apr-2000 Hits: 584 Rating: 0 Votes: 0
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GtRDB: The Genomic tRNA Database
- This genomic tRNA database contains tRNA identifications made by the program tRNAscan-SE on complete or nearly complete genomes.
http://rna.wustl.edu/tRNAdb/
Added: 10-Nov-2002 Hits: 509 Rating: 0 Votes: 0
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ncRNA
- Noncoding RNAs Database.
http://biobases.ibch.poznan.pl/ncRNA/
Added: 10-Nov-2002 Hits: 550 Rating: 0 Votes: 0
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Real Time PCR Primer Sets
- Database of validated primer sets for quantitative PCR.
http://www.realtimeprimers.org
Added: 10-Jun-2005 Hits: 88 Rating: 0 Votes: 0
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Ribosomal Database Project II
- The Ribosomal Database Project (RDP) provides ribosome related data services to the scientific community, including online data analysis, rRNA derived phylogenetic trees, and aligned and annotated rRNA sequences.
http://rdp.cme.msu.edu/html/
Added: 10-Nov-2002 Hits: 416 Rating: 0 Votes: 0
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RNABase
- RNABase is an annotated database of all publicly available RNA structures.
http://www.rnabase.org/
Added: 10-Nov-2002 Hits: 505 Rating: 0 Votes: 0
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rRNA database
- The European ribosomal RNA database.
http://oberon.rug.ac.be:8080/rRNA/
Added: 10-Nov-2002 Hits: 607 Rating: 5.50 Votes: 2
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siRNA Database
- Database of siRNA target sequences and other resources for RNA interference studies
http://www.rnainterference.org
Added: 10-Jun-2005 Hits: 214 Rating: 0 Votes: 0
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Small RNA database
- Small RNAs are broadly defined as the RNAs not directly involved in protein synthesis. Small RNAs are usually in the 75-400 nucleotides range, although some are as long as thousand base pairs. They are synthesized by either RNA Polymerase I, II or III. The sequences reported here are based on actual sequence determinations and not on the basis of oligonucleotide catalogs.
http://mbcr.bcm.tmc.edu/smallRNA/smallrna.html
Added: 10-Nov-2002 Hits: 792 Rating: 1.00 Votes: 1
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The RNA Modification Database
- The RNA modification database provides a comprehensive listing of posttranscriptionally modified nucleosides from RNA.
http://medstat.med.utah.edu/RNAmods/
Added: 10-Nov-2002 Hits: 478 Rating: 0 Votes: 0
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