Top : Databases : RNA Databases
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5S ribosomal RNA Database
- The purpose of this database is to provide information on nucleotide sequences of 5S rRNAs and their genes. The sequences for particular organisms can be retrieved as single files using a taxonomic browser or in multiple sequence structural alignments.
http://www.man.poznan.pl/5SData/
Added: 18-Apr-2000 Hits: 584 Rating: 0 Votes: 0 [ Rate It]
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GtRDB: The Genomic tRNA Database
- This genomic tRNA database contains tRNA identifications made by the program tRNAscan-SE on complete or nearly complete genomes.
http://rna.wustl.edu/tRNAdb/
Added: 10-Nov-2002 Hits: 509 Rating: 0 Votes: 0 [ Rate It]
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ncRNA
- Noncoding RNAs Database.
http://biobases.ibch.poznan.pl/ncRNA/
Added: 10-Nov-2002 Hits: 550 Rating: 0 Votes: 0 [ Rate It]
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Real Time PCR Primer Sets
- Database of validated primer sets for quantitative PCR.
http://www.realtimeprimers.org
Added: 10-Jun-2005 Hits: 88 Rating: 0 Votes: 0 [ Rate It]
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Ribosomal Database Project II
- The Ribosomal Database Project (RDP) provides ribosome related data services to the scientific community, including online data analysis, rRNA derived phylogenetic trees, and aligned and annotated rRNA sequences.
http://rdp.cme.msu.edu/html/
Added: 10-Nov-2002 Hits: 416 Rating: 0 Votes: 0 [ Rate It]
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RNABase
- RNABase is an annotated database of all publicly available RNA structures.
http://www.rnabase.org/
Added: 10-Nov-2002 Hits: 505 Rating: 0 Votes: 0 [ Rate It]
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rRNA database
- The European ribosomal RNA database.
http://oberon.rug.ac.be:8080/rRNA/
Added: 10-Nov-2002 Hits: 607 Rating: 5.50 Votes: 2 [ Rate It]
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siRNA Database
- Database of siRNA target sequences and other resources for RNA interference studies
http://www.rnainterference.org
Added: 10-Jun-2005 Hits: 214 Rating: 0 Votes: 0 [ Rate It]
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Small RNA database
- Small RNAs are broadly defined as the RNAs not directly involved in protein synthesis. Small RNAs are usually in the 75-400 nucleotides range, although some are as long as thousand base pairs. They are synthesized by either RNA Polymerase I, II or III. The sequences reported here are based on actual sequence determinations and not on the basis of oligonucleotide catalogs.
http://mbcr.bcm.tmc.edu/smallRNA/smallrna.html
Added: 10-Nov-2002 Hits: 792 Rating: 1.00 Votes: 1 [ Rate It]
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The RNA Modification Database
- The RNA modification database provides a comprehensive listing of posttranscriptionally modified nucleosides from RNA.
http://medstat.med.utah.edu/RNAmods/
Added: 10-Nov-2002 Hits: 478 Rating: 0 Votes: 0 [ Rate It]
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